Biopathway, an iLENS service, helps biologists by utilizing natural language processing techniques for biomedical applications. Biopathway is currently focused on the following areas: information extraction for biomedicine, automatic construction of gene and protein ontologies, visualization of inferred gene and protein networks, natural language query interpretation for heterogeneous database access, and automatic creation of gene summary. These applications can be synergistically integrated for effective knowledge discovery.

BioIE: Extraction of Biological Interactions:

AutoGO: Automatic Construction of Gene and Protein Ontologies

BiopathwayBuilder: Visualization of Inferred Gene and Protein Networks

BioNLQ: Natural Language Query for Heterogenous Database Access

BioContrasts: Knowledge Discovery with Protein-Protein Contrasts

Automatic Generation of Gene Summary

  for children  
for elderly
for challenged
for experts

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